Which immune response is particularly efficient and can contribute to the development of a new vaccine?

What is this research project about?

Virus hepatitis: Model of a hepatitis C virus

What is this research project about?

Hepatitis C virus (HCV) has chronically infected ca. 71 million people worldwide. These patients are at risk of severe liver disease including hepatocellular carcinoma. The WHO has reported approximately 400.000 HCV-associated deaths for 2015. Novel HCV combination therapies cure more than 95% of treated patients. However, many people are unaware of their infection, and high treatment costs limit access to therapy. In addition, successful therapy does not protect from viral re-infection, which occurs readily in populations with frequent virus exposure (e.g. people who inject drugs). For these reasons HCV transmission remains high and consequently development of a prophylactic HCV vaccine is an unmet medical need. In fact, recent studies suggest that global control of HCV will only be possible with a prophylactic HCV vaccine combined with antiviral treatment.

What’s the current status?

The quality of the cellular immunity has an important influence on the clinical outcome of HCV infection. Moreover, accumulating evidence underpins the key role of broadly neutralizing antibodies (bnAbs) in the control of acute and chronic HCV infection. Notably, 20-30% of exposed individuals naturally clear the infection and immunization with recombinant glycoproteins elicits neutralizing antibodies in animal models. These findings raise hopes that development of a prophylactic HCV vaccine is possible.

The HCV surface proteins E1 and E2 are the major targets for bnAbs and therefore in the focus of vaccine research. However, HCV has evolved a number of evasion mechanisms, which complicate development of E1-E2-directed vaccines: Extensive sugar modifications of E1 and E2, and flexibility of key antibody target sites reduce immunogenicity. Moreover, most antibodies are directed against highly variable viral “decoy” target sites, which readily mutate, rendering these antibodies ineffective.

Concept of the HCV vaccine project: The Identifikation of “Elite” neutralizers – HCV patients who eliminate an infection or have a low viral load – is being translated into innovative vaccine approaches.

What are the project goals?

Informed vaccine design requires in-depth understanding of the key target sites (epitopes) recognized by potent neutralizing antibodies. However, we know relatively little about the evolution of HCV bnAbs in humans, about the epitopes they target and the maturation pathways that B cells undergo to produce them. Therefore, our key aim will be the identification of individuals with a particularly efficient antibody response to HCV (so called “elite” neutralizers). A detailed characterization of unique and powerful bnAbs from these patients will reveal a footprint of an efficient HCV-specific antibody response. It will reveal key characteristics required for evolution of potent neutralizing antibodies and will serve as gold standard guiding vaccine development. Based on these novel insights we will create vaccine candidates applying recently emerging methods of structure-based immunogen design to elicit such a bnAb response upon immunization.

How do we get there?

A paramount step in this project will be the identification of such “elite” neutralizers from the patients treated in the MHH hepatitis outpatient clinic by performing a large-scale neutralization screening. In order to identify these patients with a particularly efficient immune response, the project uses the hepatitis C cohort of the MHH. This screening will identify elite neutralizers as well as patients with moderate or weak antibody responses. Consequently, it will enable molecular analyses of the determinants that control evolution of powerful antibodies. To this end, we will use single cell-resolved B cell profiling in these different patient groups to investigate differences in the B cell repertoires that correlate with evolution of phenotypically distinct antibody responses. To identify potent HCV-specific bnAbs, we will isolate B cells from elite neutralizers. Subsequently, we will sequence and clone B cell receptor genes. We will measure neutralization potency and will functionally and structurally analyze antibody-antigen complexes for the most powerful antibodies. This work should provide detailed structural information on neutralization epitopes and antigen recognition by potent bnAbs. It will pave the way for the use of novel computational methods for immunogen design using structure-based strategies with the primary goal to optimize immunogenic epitope presentation for enhanced induction of epitope-specific antibodies.

Projectleaders

Project title: HCV vaccine

Prof. Dr. Thomas Pietschmann

Projekte: A1, B10

Prof. Dr. Thomas Krey

Projekte: B10, D1

Prof. Dr. Markus Cornberg

Projects: B8, B9, B10

Prof. Dr. Alice McHardy

Projekt: B2, B10

Project B10 Publications

Publications 2023

Reverse inflammaging: Long-term effects of HCV cure on biological age. Oltmanns C, Liu Z, Mischke J, Tauwaldt J, Mekonnen YA, Urbanek-Quaing M, Debarry J, Maasoumy B, Wedemeyer H, Kraft ARM, Xu CJ, Cornberg M. J Hepatol. 2023 Jan;78(1):90-98.

Proteomics reveals a global phenotypic shift of NK cells in HCV patients treated with direct-acting antivirals. Bi W, Kraft A, Engelskircher S, Mischke J, Witte M, Klawonn F, van Ham M, Cornberg M, Wedemeyer H, Hengst J, Jänsch L. Eur J Immunol. 2023 Jul 29:e2250291.

Structural insights into hepatitis C virus neutralization. Ströh LJ, Krey T.  Curr Opin Virol. 2023 Mar 29;60:101316.

Immunological scars after cure of hepatitis C virus infection: Long-HepC? Cornberg M, Mischke J, Kraft AR, Wedemeyer H. Curr Opin Immunol. 2023 Apr 10;82:102324.

Controlled Attenuation Parameter Is Associated with a Distinct Systemic Inflammatory Milieu after Clearance of HCV Infection. Du Y, Khera T, Liu Z, Tudrujek-Zdunek M, Dworzanska A, Cornberg M, Xu CJ, Tomasiewicz K, Wedemeyer H.  Biomedicines. 2023 May 25;11(6):1529. doi: 10.3390/biomedicines11061529. PMID: 37371624; PMCID: PMC10295384.

Publications 2022

Entwicklungsansätze für Impfstoffe gegen Hepatitis-C-Virus-Infektionen [Development approaches for vaccines against hepatitis C virus infections]. Bankwitz D, Krey T, Pietschmann T.  Bundesgesundheitsblatt Gesundheitsforschung Gesundheitsschutz. 2022 Feb;65(2):183-191. German. doi: 10.1007/s00103-021-03477-9. Epub 2022 Jan 11. PMID: 35015104; PMCID: PMC8749110.

A Hepatitis C virus genotype 1b post-transplant isolate with high replication efficiency in cell culture and its adaptation to infectious virus production in vitro and in vivo. Heuss C, Rothhaar P, Burm R, Lee JY, Ralfs P, Haselmann U, Ströh LJ, Colasanti O, Tran CS, Schäfer N, Schnitzler P, Merle U, Bartenschlager R, Patel AH, Graw F, Krey T, Laketa V, Meuleman P, Lohmann V. PLoS Pathog.

Analysis of antibodies from HCV elite neutralizers identifies genetic determinants of broad neutralization. Weber T, Potthoff J, Bizu S, Labuhn M, Dold L, Schoofs T, Horning M, Ercanoglu MS, Kreer C, Gieselmann L, Vanshylla K, Langhans B, Janicki H, Ströh LJ, Knops E, Nierhoff D, Spengler U, Kaiser R, Bjorkman PJ, Krey T, Bankwitz D, Pfeifer N, Pietschmann T, Flyak AI, Klein F. Immunity.

The Human Liver-Expressed Lectin CD302 Restricts Hepatitis C Virus Infection. Reinecke B, Frericks N, Lauber C, Dinkelborg K, Matthaei A, Vondran FWR, Behrendt P, Haid S, Brown RJP, Pietschmann T. J Virol.

T. Liver-expressed Cd302 and Cr1l limit hepatitis C virus cross-species transmission to mice. Brown RJP, Tegtmeyer B, Sheldon J, Khera T, Anggakusuma, Todt D, Vieyres G, Weller R, Joecks S, Zhang Y, Sake S, Bankwitz D, Welsch K, Ginkel C, Engelmann M, Gerold G, Steinmann E, Yuan Q, Ott M, Vondran FWR, Krey T, Ströh LJ, Miskey C, Ivics Z, Herder V, Baumgärtner W, Lauber C, Seifert M, Tarr AW, McClure CP, Randall G, Baktash Y, Ploss A, Thi VLD, Michailidis E, Saeed M, Verhoye L, Meuleman P, Goedecke N, Wirth D, Rice CM, Pietschmann Sci Adv.

Global and local envelope protein dynamics of hepatitis C virus determine broad antibody sensitivity. Augestad EH, Castelli M, Clementi N, Ströh LJ, Krey T, Burioni R, Mancini N, Bukh J, Prentoe J. Sci Adv.

Publications 2021

Analysis of antibodies from HCV elite neutralizers identifies genetic determinants of broad neutralization. Weber T, Potthoff J, Bizu S, Labuhn M, Dold L, Schoofs T, Horning M, Ercanoglu MS, Kreer C, Gieselmann L, Vanshylla K, Langhans B, Janicki H, Ströh LJ, Knops E, Nierhoff D, Spengler U, Kaiser R, Bjorkman PJ, Krey T, Bankwitz D, Pfeifer N, Pietschmann T, Flyak AI, Klein F. Immunity.

EpitopeVec: Linear Epitope Prediction Using Deep Protein Sequence Embeddings. Bioinformatics. Bahai A, Asgari E, Mofrad MRK, Kloetgen A, McHardy AC.

Imprint of unconventional T-cell response in acute hepatitis C persists despite successful early antiviral treatment. Du Y, Khera T, Strunz B, Deterding K, Todt D, Woller N, Engelskircher SA, Hardtke S, Port K, Ponzetta A, Steinmann E, Cornberg M, Hengst J, Björkström NK, Wedemeyer H; HepNet Acute HCV Ⅳ Study Group. Eur J Immunol.

Publications 2020

Efficient homing of T cells via afferent lymphatics requires mechanical arrest and integrin-supported chemokine guidance. Martens R, Permanyer M, Werth K, Yu K, Braun A, Halle O, Halle S, Patzer GE, Bošnjak B, Kiefer F, Janssen A, Friedrichsen M, Poetzsch J, Kohli K, Lueder Y, Gutierrez Jauregui R, Eckert N, Worbs T, Galla M, Förster R. Nat Commun.

Hepatitis C reference viruses highlight potent antibody responses and diverse viral functional interactions with neutralising antibodies. Bankwitz D, Bahai A, Labuhn M, Doepke M, Ginkel C, Khera T, Todt D, Ströh LJ, Dold L, Klein F, Klawonn F, Krey T, Behrendt P, Cornberg M, McHardy AC, Pietschmann T. Gut. 2020

Liver-expressed Cd302 and Cr1l limit hepatitis C virus cross-species transmission to mice. Brown RJP, Tegtmeyer B, Sheldon J, Khera T, Anggakusuma, Todt D, Vieyres G, Weller R, Joecks S, Zhang Y, Sake S, Bankwitz D, Welsch K, Ginkel C, Engelmann M, Gerold G, Steinmann E, Yuan Q, Ott M, Vondran FWR, Krey T, Ströh LJ, Miskey C, Ivics Z, Herder V, Baumgärtner W, Lauber C, Seifert M, Tarr AW, McClure CP, Randall G, Baktash Y, Ploss A, Thi VLD, Michailidis E, Saeed M, Verhoye L, Meuleman P, Goedecke N, Wirth D, Rice CM, Pietschmann Sci Adv.

HCV Glycoprotein Structure and Implications for B-Cell Vaccine Development. Ströh LJ, Krey T. Int J Mol Sci.

Global and local envelope protein dynamics of hepatitis C virus determine broad antibody sensitivity. Augestad EH, Castelli M, Clementi N, Ströh LJ, Krey T, Burioni R, Mancini N, Bukh J, Prentoe J. Sci Adv.

De novo protein design enables the precise induction of RSV-neutralizing antibodies. Sesterhenn F, Yang C, Bonet J, Cramer JT, Wen X, Wang Y, Chiang CI, Abriata LA, Kucharska I, Castoro G, Vollers SS, Galloux M, Dheilly E, Rosset S, Corthésy P, Georgeon S, Villard M, Richard CA, Descamps D, Delgado T, Oricchio E, Rameix-Welti MA, Más V, Ervin S, Eléouët JF, Riffault S, Bates JT, Julien JP, Li Y, Jardetzky T, Krey T, Correia BE. Science.

Efficient acute and chronic infection of stem cell-derived hepatocytes by hepatitis C virus. Carpentier A, Sheldon J, Vondran FWR, Brown RJ, Pietschmann T. Gut.

Publications of the Project B10